EvanDB | Euplotes Genome Database Wiki

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Recent Papers

Irudayarajan L, Ravindran C, Raveendran HP (2023) Antimicrobial activity of coral-associated beneficial bacteria against coral disease-causing microbial pathogens. Journal of basic microbiology :
PUBMED:37726211

Jin D, Li C, Chen X, Byerly A, Stover NA, Zhang T, Shao C, Wang Y (2023) Comparative genome analysis of three euplotid protists provides insights into the evolution of nanochromosomes in unicellular eukaryotic organisms. Marine life science & technology 5:300-315
PUBMED:37637252

Di Giuseppe G, Alimenti C, Luporini P, Vallesi A (2023) A new dataset of pheromone and pheromone-gene structures from the ciliate, . Data in brief 49:109430
PUBMED:37538957

BLAST Server at EvanDB

Click here for information about the BLAST process and help with advanced options.

BLAST Program

blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database

Database

Euplotes vannus (protein)
Euplotes vannus CDS (nucleotide)
Euplotes vannus Assembly (nucleotide)
Euplotes aediculatus (protein)
Euplotes aediculatus CDS (nucleotide)
Euplotes aediculatus Assembly (nucleotide)

Query Sequence Enter sequence below in FASTA format

Or load it from disk:
Set subsequence from to

Advanced Options

Filter for low copmlexity regions

Perform ungapped alignment

Expect
Matrix
Alignments

Query Genetic Codes (blastx only)
Database Genetic Codes (tblast[nx] only)

Other advanced options:

Wiki Links

External Links

Ciliate Genomics Consortium
Song Lab (OUC)

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The Ciliate.org project at Bradley University is supported by a grant from the National Center for Research Resources, part of the US National Institutes of Health.