EvanDB | Euplotes Genome Database Wiki

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Recent Papers

Pucciarelli S, Mozzicafreddo M, Vassallo A, Piersanti A, Miceli C (2024) Molecular Evolution and Adaptation Strategies in Marine Ciliates: An Inspiration for Cold-Adapted Enzyme Engineering and Drug Binding Analysis. Marine drugs 22:
PUBMED:39590777

Li F, Yang J, Li J, Lin X (2024) Adaptive Strategies and Underlying Response Mechanisms of Ciliates to Salinity Change with Note on Fluctuation Properties. Microorganisms 12:
PUBMED:39458267

Jiang Y, Chen X, Wang C, Lyu L, Al-Farraj SA, Stover NA, Gao F (2024) Genes and proteins expressed at different life cycle stages in the model protist Euplotes vannus revealed by both transcriptomic and proteomic approaches. Science China. Life sciences :
PUBMED:39276255

BLAST Server at EvanDB

Click here for information about the BLAST process and help with advanced options.

BLAST Program

blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database

Database

Euplotes vannus (protein)
Euplotes vannus CDS (nucleotide)
Euplotes vannus Assembly (nucleotide)
Euplotes aediculatus (protein)
Euplotes aediculatus CDS (nucleotide)
Euplotes aediculatus Assembly (nucleotide)

Query Sequence Enter sequence below in FASTA format

Or load it from disk:
Set subsequence from to

Advanced Options

Filter for low copmlexity regions

Perform ungapped alignment

Expect
Matrix
Alignments

Query Genetic Codes (blastx only)
Database Genetic Codes (tblast[nx] only)

Other advanced options:

Wiki Links

External Links

Ciliate Genomics Consortium
Song Lab (OUC)

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The Ciliate.org project at Bradley University is supported by a grant from the National Center for Research Resources, part of the US National Institutes of Health.